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Special Semester on Quantitative Biology analyzed by Mathematical Methods
Linz, October 1, 2007 - January 27, 2008
Numerical methods for large-scale 3D image sequence analysis

Workshop on Bioimaging II / PDEs, Thu, 22 Nov, 2007

Speaker: Karol Mikula

Abstract

We will discuss how nonlinear partial differential equations can be used
to analyse (denoise, segment and extract further useful information) from large-scale 3D image sequences arising e.g. in cell
developmental biology. We apply finite volume spatial discretizations and semi-implicit time discretizations to geometrical advection-diffusion equations related to level set formulation of the surface evolution problems.
The methods are unconditionally stable, robust, fast and naturally
parallelizable.

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